Публикации

Публикации за последние 5 лет, ключевые публикации, патенты.

GTRD: an integrated view of transcription regulation.

Semyon Kolmykov, Ivan Yevshin, Mikhail Kulyashov, Ruslan Sharipov, Yury Kondrakhin, Vsevolod J. Makeev, Ivan V. Kulakovskiy, Alexander Kel, Fedor Kolpakov.

Nucleic Acids Res. 2021; 49 (D1): D104-D111. doi: 10.1093/nar/gkaa1057.
Группа регуляции биосинтеза белка
2021
PubMed
Regulation of Ribosomal Protein Synthesis in Prokaryotes.

A.O. Mikhaylina, E.Y. Nikonova, O.S. Kostareva, S.V. Tishchenko.

Mol Biol (Mosk). 2021; 55 (1): 20-41. doi: 10.31857/S0026898421010110.
Лаборатория структурных исследований аппарата трансляции
2021
PubMed
Associations between Neurological Diseases and Mutations in the Human Glycyl-tRNA Synthetase.

Ekaterina S. Vinogradova, Oleg S. Nikonov, Ekaterina Yu. Nikonova.

Biochemistry (Mosc). 2021;86(Suppl 1): S12-S23. doi: 10.1134/S0006297921140029.
Лаборатория структурных исследований аппарата трансляции
2021
PubMed
Diversity of LSM Family Proteins: Similarities and Differences.

Natalia V. Lekontseva, Elena A. Stolboushkina, Alexey D. Nikulin.

Biochemistry (Mosc). 2021; 86 (Suppl 1): S38-S49. doi: 10.1134/S0006297921140042.
Группа структурных исследований рибосомных белков, Лаборатория структурных исследований аппарата трансляции
2021
PubMed
Assessing Ribosome Distribution Along Transcripts with Polarity Scores and Regression Slope Estimates.

Ilya E. Vorontsov, Artyom A. Egorov, Aleksandra S. Anisimova , Irina A. Eliseeva , Vsevolod J. Makeev, Vadim N. Gladyshev, Sergey E. Dmitriev, Ivan V. Kulakovskiy. 

Methods Mol Biol. 2021; 2252: 269-294. doi: 10.1007/978-1-0716-1150-0_13.
Группа регуляции биосинтеза белка
2021
PubMed
The role of positive charged residue in the proton-transfer mechanism of two-domain laccase from Streptomyces griseoflavus Ac-993.

Azat Gabdulkhakov, Ilya Kolyadenko, Paulo Oliveira, Paula Tamagnini, Alisa Mikhaylina, Svetlana Tishchenko.

J Biomol Struct Dyn. 2021; 1-8. doi: 10.1080/07391102.2021.1911852. Online ahead of print.
Группа структурных исследований макромолекулярных комплексов, Лаборатория структурных исследований аппарата трансляции
2021
PubMed
Sequence and evolutionary analysis of bacterial ribosomal S1 proteins.

Evgeniya Deryusheva, Andrey Machulin, Maxim Matyunin, Oxana Galzitskaya.

Proteins. 2021. doi: 10.1002/prot.26084. Online ahead of print.
Лаборатория биоинформатических и протеомных исследований
2021
PubMed
Myosin Binding Protein-C Forms Amyloid-Like Aggregates In Vitro.

Liya G. Bobyleva, Sergey A. Shumeyko, Elmira I. Yakupova , Alexey K. Surin, Oxana V. Galzitskaya, Hiroshi Kihara, Alexander A. Timchenko, Maria A. Timchenko, Nikita V.  Penkov, Alexey D. Nikulin, Mariya Yu. Suvorina, Nikolay V. Molochkov, Mikhail Yu. Lobanov, Roman S. Fadeev, Ivan M. Vikhlyantsev, Alexander G. Bobylev.

Int J Mol Sci. 2021; 22 (2):731. doi: 10.3390/ijms22020731.
Группа экспериментальных исследований и инженерии олигомерных структур, Лаборатория биоинформатических и протеомных исследований, Лаборатория структурных исследований аппарата трансляции
2021
PubMed
Multifaceted Mechanism of Amicoumacin A Inhibition of Bacterial Translation.

Elena M. Maksimova, Daria S. Vinogradova, Ilya A. Osterman, Pavel S. Kasatsky, Oleg S. Nikonov, Pohl Milón, Olga A. Dontsova, Petr V. Sergiev, Alena Paleskava, Andrey L. Konevega.

Front Microbiol. 2021; 12: 618857. doi: 10.3389/fmicb.2021.618857. eCollection 2021.
Лаборатория структурных исследований аппарата трансляции
2021
PubMed
Positioning of endoplasmic reticulum exit sites around the Golgi depends on BicaudalD2 and Rab6 activity.

Olga Shomron, Koret Hirschberg, Anton Burakov, Rimma Kamentseva, Elena Kornilova , Elena Nadezhdina , Ilya Brodsky.

Traffic. 2021; 22 (3): 64-77. doi: 10.1111/tra.12774. Epub 2020 Dec 27.
Группа физиологии цитоскелета
2021
PubMed
Heat denaturation of ribonuclease under high pressure: Differential scanning microcalorimetry study.

A.Y. Yegorov, S.A. Potekhin.

Thermochimica Acta. 2021.Volume 698, 178885. doi:10.1016/j.tca.2021.178885.
Группа термодинамики белка
2021
ScienceDirect
Characterization of Regulatory Elements of L11 and L1 Operons in Thermophilic Bacteria and Archaea.

Alisa O. Mikhaylina, Ekaterina Y. Nikonova, Olga S. Kostareva, Wolfgang Piendl , Matthias Erlacher , Svetlana V. Tishchenko. 

Biochemistry (Mosc). 2021; 86 (4): 397-408. doi: 10.1134/S0006297921040027.
Лаборатория структурных исследований аппарата трансляции
2021
PubMed
ATP-Independent Initiation during Cap-Independent Translation of m 6 A-Modified mRNA.

Pavel A. Sakharov, Egor A. Smolin , Dmitry N. Lyabin, Sultan C. Agalarov.

Int J Mol Sci. 2021; 22 (7): 3662. doi: 10.3390/ijms22073662.
Группа регуляции биосинтеза белка, Лаборатория механизмов биосинтеза белка
2021
PubMed
Acceptive Immunity: The Role of Fucosylated Glycans in Human Host-Microbiome Interactions.

Svetlana Kononova , Ekaterina Litvinova , Timur Vakhitov, Maria Skalinskaya , Stanislav Sitkin. 

Int J Mol Sci. 2021; 22 (8): 3854.doi: 10.3390/ijms22083854.
Группа регуляции биосинтеза белка
2021
PubMed
Critical assessment of protein intrinsic disorder prediction.

Marco Necci , Damiano Piovesan , CAID Predictors; DisProt Curators; Silvio C E Tosatto.
Collaborators: Md Tamjidul Hoque, Ian Walsh, Sumaiya Iqbal, Michele Vendruscolo, Pietro Sormanni, Chen Wang, Daniele Raimondi, Ronesh Sharma, Yaoqi Zhou, Thomas Litfin, Oxana Valerianovna Galzitskaya, Michail Yu Lobanov, Wim Vranken, Björn Wallner, Claudio Mirabello, Nawar Malhis, Zsuzsanna Dosztányi, Gábor Erdős, Bálint Mészáros, Jianzhao Gao, Kui Wang, Gang Hu, Zhonghua Wu, Alok Sharma, Jack Hanson, Kuldip Paliwal, Isabelle Callebaut, Tristan Bitard-Feildel, Gabriele Orlando, Zhenling Peng, Jinbo Xu, Sheng Wang, David T Jones, Domenico Cozzetto, Fanchi Meng, Jing Yan, Jörg Gsponer, Jianlin Cheng, Tianqi Wu, Lukasz Kurgan, Vasilis J Promponas, Stella Tamana, Cristina Marino-Buslje, Elizabeth Martínez-Pérez, Anastasia Chasapi, Christos Ouzounis, A Keith Dunker, Andrey V Kajava, Jeremy Y Leclercq, Burcu Aykac-Fas, Matteo Lambrughi, Emiliano Maiani, Elena Papaleo, Lucia Beatriz Chemes, Lucía Álvarez, Nicolás S González-Foutel, Valentin Iglesias, Jordi Pujols, Salvador Ventura, Nicolás Palopoli, Guillermo Ignacio Benítez, Gustavo Parisi, Claudio Bassot, Arne Elofsson, Sudha Govindarajan, John Lamb, Marco Salvatore, András Hatos, Alexander Miguel Monzon, Martina Bevilacqua, Ivan Mičetić, Giovanni Minervini, Lisanna Paladin, Federica Quaglia, Emanuela Leonardi, Norman Davey, Tamas Horvath, Orsolya Panna Kovacs, Nikoletta Murvai, Rita Pancsa, Eva Schad, Beata Szabo, Agnes Tantos, Sandra Macedo-Ribeiro, Jose Antonio Manso, Pedro José Barbosa Pereira, Radoslav Davidović, Nevena Veljkovic, Borbála Hajdu-Soltész, Mátyás Pajkos, Tamás Szaniszló, Mainak Guharoy, Tamas Lazar, Mauricio Macossay-Castillo, Peter Tompa.

Nat Methods. 2021; 18 (5): 472-481. doi: 10.1038/s41592-021-01117-3.
Лаборатория биоинформатических и протеомных исследований
2021
PubMed

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